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Home > Publications
Publications
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We are making the the manuscripts listed on this page available to the academic community for use in teaching and research. The copyrights associated with each paper remain with the appropriate parties.
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McAllister KA, Zou H, Cochran FV, Bender GM, Senes A, Fry HC, Nanda V, Keenan PA, Lear JD, Saven JG, Therien MJ, Blasie JK, DeGrado WF. "Using alpha-helical coiled-coils to design nanostructured metalloporphyrin arrays." J Am Chem Soc. 2008 130(36) 11921-7
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Finikova OS, Troxler T, Senes A, DeGrado WF, Hochstrasser RM, Vinogradov SA. "Energy and electron transfer in enhanced two-photon-absorbing systems with triplet cores." J Phys Chem A. 2007 111(30) 6977-90
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Senes A, Chadi DC, Law PB, Walters RF, Nanda V, Degrado WF. "E(z), a depth-dependent potential for assessing the energies of insertion of amino acid side-chains into membranes, derivation and applications to determining the orientation of transmembrane and interfacial helices." J Mol Biol. 2007 366(2), 436-48
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Fang C, Senes A, Cristian L, DeGrado WF, Hochstrasser RM. "Amide vibrations are delocalized across the hydrophobic interface of a transmembrane helix dimer." Proc Natl Acad Sci U S A. 2006 103(45), 16740-5
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Lehnert U, Xia Y, Royce TE, Goh CS, Liu Y, Senes A, Yu H, Zhang ZL, Engelman DM, Gerstein M. "Computational analysis of membrane proteins: genomic occurrence, structure prediction and helix interactions." Q Rev Biophys. 2004 37(2), 121-46
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Senes A, Engel DE, DeGrado WF. "Folding of helical membrane proteins: the role of polar, GxxxG-like and proline motifs." Curr Opin Struct Biol. 2004 14(4), 465-79
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Engelman DM, Chen Y, Chin CN, Curran AR, Dixon AM, Dupuy AD, Lee AS, Lehnert U, Matthews EE, Reshetnyak YK, Senes A, Popot JL. "Membrane protein folding: beyond the two stage model." FEBS Lett. 2003 555(1), 122-5
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Lin J, Qian J, Greenbaum D, Bertone P, Das R, Echols N, Senes A, Stenger B, Gerstein M. "GeneCensus, genome comparisons in terms of metabolic pathway activity and protein family sharing." Nucleic Acids Res. 2002 30(20), 4574-82
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Senes A, Ubarretxena-Belandia I, Engelman DM. "The Calpha ---H...O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions." Proc Natl Acad Sci U S A. 2001 98(16), 9056-61
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Senes A, Gerstein M, Engelman DM. "Statistical analysis of amino acid patterns in transmembrane helices: the GxxxG motif occurs frequently and in association with beta-branched residues at neighboring positions." J Mol Biol. 2000 296(3), 921-36
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Formato M, Senes A, Soccolini F, Coinu R, Cherchi GM. "A reversed phase HPLC method for the simultaneous determination of all monosaccharides contained in galactosaminoglycan isomers from human aorta proteoglycans." Carbohydr Res. 1994 255, 27-39
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Senes A, Siddi F, Cherchi GM, Formato M. "Separation and quantification of glycosaminoglycans using HPLC." Boll Soc Ital Biol Sper. 1993 69(1), 13-9
PubMed
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Senes A, Siddi F, Demuro P, Formato M, Cherchi GM. "Characterization of plasma glycosaminoglycans in hemodialysis patients." Boll Soc Ital Biol Sper. 1992 68(12), 741-7
PubMed
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Siddi F, Senes A, Coinu R, Formato M, Cherchi GM. "Study of the interaction between plasma proteoglycans and LDL by means of fluorescence spectroscopy." Boll Soc Ital Biol Sper. 1992 68(11), 655-61
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